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Pagnier J, Daraghmeh N, Obst M (2024) Assessing the effectiveness of genetic observatory networks in detecting and monitoring marine non-indigenous species. Biological Invasions. PREPRINT (Version 1) available at Research Square https://doi.org/10.21203/rs.3.rs-4804152/v1
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Green L, Dahlgren TG, Axberg A, Panova M, Obst M, Sundberg P (2024) Monitoring of the invasive round goby in an estuarine seascape based on eDNA. bioRxiv, 2024.05. 06.592655, doi: https://doi.org/10.1101/2024.05.06.592655
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Morin F, Panova M, Schweizer M, Wiechmann M, Eliassen N, Sundberg P, Cluzel-Burgalat L, Polovodova Asteman I (2023) Hidden aliens: Application of digital PCR to track an exotic foraminifer across the Skagerrak (North Sea) correlates well with traditional morphospecies analysis. Environ Microbiol. DOI: 10.1111/1462-2920.16458
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Santi et al (2023) European marine omics biodiversity observation network: a strategic outline for the implementation of omics approaches in ocean observation. Front. Mar. Sci. 10:1118120. doi: 10.3389/fmars.2023.1118120
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Martaeng R, Obst M, Kuklinski P (2023) Phylogeographic study using autonomous reef monitoring structures indicates fast range expansion of the invasive bryozoan Juxtacribrilina mutabilis. Hydrobiologia, https://doi.org/10.1007/s10750-023-05184-9
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Tara Ocean Foundation., Tara Oceans., European Molecular Biology Laboratory (EMBL). et al. Priorities for ocean microbiome research. Nature Microbiology 7, 937–947 (2022). https://doi.org/10.1038/s41564-022-01145-5
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Staehr PAU, Dahl K, Buur H, Göke C, Sapkota R, Winding A, Panova M, Obst M, Sundberg P (2022) Environmental DNA Monitoring of Biodiversity Hotspots in Danish Marine Waters. Frontiers in Marine Sciences. doi: 10.3389/fmars.2021.800474
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Santi I, Casotti R, Comtet T, Cunliffe M, Koulouri PY, Macheriotou L, Not F, Obst M, et al (2021) European Marine Omics Biodiversity Observation Network (EMO BON) Handbook (Version 1.0). EMBRC-ERIC. https://repository.oceanbestpractices.org/handle/11329/1738
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Exter K, Decruw C, Portier M, Gerovasileiou V, Pavloudi C, Obst M (2020) Genomics Observatory Use-Case: The challenge to standardise image and sequence data to Darwin Core format. Biodiversity Information Science and Standards 4: e58938
doi: 10.3897/biss.4.58938 -
Obst M, Exter K, Allcock AL, ... Axberg A,...Sundberg P,....Pavloudi C (2020) A Marine Biodiversity Observation Network for Genetic Monitoring of Hard-Bottom Communities (ARMS-MBON). Frontiers in Marine Science 7: 1031. DOI:10.3389/fmars.2020.572680
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Guidi, L., Fernandez Guerra, A., Canchaya, C., Curry, E., Foglini, F., Irisson, J.-O., Malde, K., Marshall, C. T., Obst, M., Ribeiro, R. P., Tjiputra, J., Bakker, D. C. E.,. Alexander, B., Heymans, J. J., Muñiz Piniella, A., Kellett, P., Coopman, J. (2020) Big Data in Marine Science Future Science Brief 6 of the European Marine Board, Ostend, Belgium. ISBN: 9789492043931.
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Pavloudi C, Chrismas N, Troncoso JS, Norkko J, Viard F, Mortelmans J, Mavric B, Gerovasileiou V, Arvanitidis C, Kotoulas G, Obst M (2019). Artificial Reef Monitoring Structures (ARMS) providing insights on the marine biodiversity and community structure. Genomic Observatories
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Karlsson R, Obst M, Berggren M (2019) Analysis of potential distribution and impacts for two species of alien crabs in Northern Europe. Biological Invasions 21(10): 3109-3119.
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Walls R, Amaral-Zettler LA, Buttigieg PL, Deck J, Kotoulas G, Meyer C, Obst M, et al (2018) Genomic Observatories Network: socio-technical perspectives on the path to long-term multi-omic observation. American Geophysical Union, AGU Fall Meeting 2018, abstract #B41L-2879
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Kissling DW, Ahumada JA, Bowser A, Fernandez M, Fernandez N, Alonso García E, Guralnick RP, Isaac NJB, Kelling S, Los W, McRae L, Mihoub JB, Obst M, et al(2017) Building essential biodiversity variables (EBVs) of species distribution and abundance at a global scale. Biological Reviews. DOI: 10.1111/brv.12359.
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Haenel, Q., Holovachov, O., Jondelius, U., Sundberg, P., Bourlat S.J. (2017) NGS-based biodiversity and community structure analysis of meiofaunal eukaryotes in shell sand from Hållö island, Smögen, and soft mud from Gullmarn Fjord, Sweden. Biodiversity Data Journal 5: e12731.
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Obst M, et al (2017) Marine long-term biodiversity assessment suggests loss of rare species in the Skagerrak and Kattegat region. Marine Biodiversity. DOI: 10.1007/s12526-017-0749-5.
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Leidenberger S, Obst M, Kulawik R, Stelzer K, Heyer K, Hardisty A, Bourlat SJ (2015) Evaluating the potential of ecological niche modelling as a component in non-indigenous species risk assessments. Marine Pollution Bulletin. 97: 470-487.
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Laugen AT, Hollander J, Obst M, Strand A (2015) The Pacific Oyster (Crassostrea gigas) invasion in Scandinavian coastal waters in a changing climate: impact on local ecosystem services. Biological Invasions in Aquatic and Terrestrial Systems: Biogeography, Ecological Impacts, Predictions, and Management. De Gruyter, Warsaw. Pp. 232-257
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Stelzer K, Heyer K, Bourlat S, Obst M (2013) Application of Niche Modeling and Earth Observation for the risk assessment and monitoring of invasive species in the Baltic Sea. Report MarCoast II - Marine and Coastal Environmental Information Services, Ballast Water Option, pp 57.
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Bourlat SJ, Borja A, Gilbert J, Taylor MI, Davies N, Weisberg SB, Griffith JF, Lettieri T, Field D, Benzie J, Glöckner FO, Rodríguez-Ezpeleta N, Faith DP, Bean TP, Obst M (2013) Genomics in marine monitoring: new opportunities for assessing marine health status. Marine Pollution Bulletin 74(1): 19–31.